IEEE - Institute of Electrical and Electronics Engineers, Inc. - Optimizing Burrows-Wheeler Transform-Based Sequence Alignment on Multicore Architectures

2013 13th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid)

Author(s): Jing Zhang ; Heshan Lin ; Pavan Balaji ; Wu-Chun Feng
Publisher: IEEE - Institute of Electrical and Electronics Engineers, Inc.
Publication Date: 1 May 2013
Conference Location: Delft, Netherlands
Conference Date: 13 May 2013
Page(s): 377 - 384
ISBN (Electronic): 978-0-7695-4996-5
ISBN (Paper): 978-1-4673-6465-2
DOI: 10.1109/CCGrid.2013.67
Regular:

Computational biology sequence alignment tools using the Burrows-Wheeler Transform (BWT) are widely used in next-generation sequencing (NGS) analysis. However, despite extensive optimization... View More

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