IEEE - Institute of Electrical and Electronics Engineers, Inc. - An FPGA-based parameterised and scalable optimal solutions for pairwise biological sequence analysis

2011 NASA/ESA Conference on Adaptive Hardware and Systems (AHS)

Author(s): Isa, M.N. ; Benkrid, K. ; Clayton, T. ; Ling, C. ; Erdogan, A.T.
Publisher: IEEE - Institute of Electrical and Electronics Engineers, Inc.
Publication Date: 1 June 2011
Conference Location: San Diego, CA, USA, USA
Conference Date: 6 June 2011
Page(s): 344 - 351
ISBN (Electronic): 978-1-4577-0599-1
ISBN (Paper): 978-1-4577-0598-4
ISBN (Online): 978-1-4577-0597-7
DOI: 10.1109/AHS.2011.5963957
Regular:

This paper presents the design and implementation of the computationally intensive Smith Waterman and Needleman-Wunsch algorithms on the Virtex-5 (XC5VLX110) FPGA (Field Programmable Gate Array).... View More

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