IEEE - Institute of Electrical and Electronics Engineers, Inc. - Exploration of alternative GPU implementations of the pair-HMMs forward algorithm

2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Author(s): Shanshan Ren ; Koen Bertel ; Zaid Al-Ars
Publisher: IEEE - Institute of Electrical and Electronics Engineers, Inc.
Publication Date: 1 December 2016
Conference Location: Shenzhen, China
Conference Date: 15 December 2016
Page(s): 902 - 909
ISBN (Electronic): 978-1-5090-1611-2
DOI: 10.1109/BIBM.2016.7822645
Regular:

In order to handle the massive raw data generated by next generation sequencing (NGS) platforms, GPUs are widely used by many genetic analysis tools to speed up the used algorithms. In this paper,... View More

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